dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00450
Location and strand information: 12585 - 14066 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3263
Protein molecular weight: 57715.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00451
Location and strand information: 14146 - 14562 (-)
Family: null
Protein type: null
Protein description: ATP synthase epsilon chain

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00452
Location and strand information: 14582 - 15976 (-)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit beta, sodium ion specific

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00453
Location and strand information: 15992 - 16879 (-)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase gamma chain, sodium ion specific

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00454
Location and strand information: 16872 - 18386 (-)
Family: 3.A.2.1.6
Protein type: TC
Protein description: ATP synthase subunit alpha

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00455
Location and strand information: 18387 - 18896 (-)
Family: null
Protein type: null
Protein description: ATP synthase subunit delta

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00456
Location and strand information: 18877 - 19377 (-)
Family: null
Protein type: null
Protein description: ATP synthase subunit b, sodium ion specific

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00457
Location and strand information: 19414 - 19641 (-)
Family: 3.A.2.1.2
Protein type: TC
Protein description: ATP synthase subunit c

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00458
Location and strand information: 19699 - 20394 (-)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit a

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00459
Location and strand information: 20654 - 21712 (+)
Family: null
Protein type: null
Protein description: UDP-glucose 4-epimerase

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00460
Location and strand information: 21966 - 23258 (+)
Family: null
Protein type: null
Protein description: Cytochrome b6-f complex iron-sulfur subunit

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00461
Location and strand information: 23339 - 25162 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00462
Location and strand information: 25159 - 26208 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00463
Location and strand information: 26455 - 26934 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00464
Location and strand information: 27281 - 29257 (+)
Family: GH151
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0384
Protein molecular weight: 76212.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00465
Location and strand information: 29262 - 30614 (+)
Family: CBM32|GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9462
Protein molecular weight: 52354.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00466
Location and strand information: 30687 - 31694 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002848_3|CGC1
Gene ID: MGYG000002848_00467
Location and strand information: 31809 - 33161 (-)
Family: 2.A.66.1.33
Protein type: TC
Protein description: putative FMN/FAD exporter YeeO

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002848_00450	hypothetical protein	CAZyme	12585	14066	+	GH29
MGYG000002848_00451	ATP synthase epsilon chain	null	14146	14562	-	ATP-synt_DE_N\| ATP-synt_DE
MGYG000002848_00452	ATP synthase subunit beta, sodium ion specific	TC	14582	15976	-	3.A.2.1.5
MGYG000002848_00453	ATP synthase gamma chain, sodium ion specific	TC	15992	16879	-	3.A.2.1.5
MGYG000002848_00454	ATP synthase subunit alpha	TC	16872	18386	-	3.A.2.1.6
MGYG000002848_00455	ATP synthase subunit delta	null	18387	18896	-	OSCP
MGYG000002848_00456	ATP synthase subunit b, sodium ion specific	null	18877	19377	-	ATP-synt_B
MGYG000002848_00457	ATP synthase subunit c	TC	19414	19641	-	3.A.2.1.2
MGYG000002848_00458	ATP synthase subunit a	TC	19699	20394	-	3.A.2.1.5
MGYG000002848_00459	UDP-glucose 4-epimerase	null	20654	21712	+	GDP_Man_Dehyd
MGYG000002848_00460	Cytochrome b6-f complex iron-sulfur subunit	null	21966	23258	+	DAO\| Rieske
MGYG000002848_00461	Vitamin B12 import ATP-binding protein BtuD	TC	23339	25162	-	3.A.1.111.2
MGYG000002848_00462	Lipid A export ATP-binding/permease protein MsbA	TC	25159	26208	-	3.A.1.111.2
MGYG000002848_00463	hypothetical protein	null	26455	26934	-	No domain
MGYG000002848_00464	hypothetical protein	CAZyme	27281	29257	+	GH151
MGYG000002848_00465	hypothetical protein	CAZyme	29262	30614	+	CBM32\| GH29
MGYG000002848_00466	hypothetical protein	null	30687	31694	-	Hydrolase_4
MGYG000002848_00467	putative FMN/FAD exporter YeeO	TC	31809	33161	-	2.A.66.1.33
Protein ID	Protein Name	Type	Start	End	Strand	Signature